Japan: Itinerary for 7 days in Kanto Area during autumn

Pre-travel:
First trip to Tokyo in 2009, only 4 days (what was I thinking?)
Second trip to Honshu in 2011 for 18 days (that's better)
Third trip to Hokkaido in 2012 for 7 days (that's alright I suppose)
Fourth trip to Kanto area (current trip) for 7 days (can't complain especially considering my holidays in 2014 :P)
And breakdown of travel days and links to accommodation.

Tokyo:
Day 1
 - Accommodation in Asakusa and breakfast in Yayoi-ken
 - Ghibli Museum and tea break at Straw Hat Cafe
 - Dinner at a random izakaya in Shinjuku

Kawasaki/Tokyo:
Day 2
 - Doraemon Museum
 - Lunch at Doraemon Museum's cafe
 - Ramen dinner at Mutekiya in Ikebukuro

Day 3
 - Walking around in Asakusa and visiting Senso-ji
 - Checking out Hayao Miyazaki's NI-TELE Really Big Clock in Shimbashi
 - Lunch in Ginza and pretending to study in University of Tokyo
 - Pre-dinner snacks and dinner in Harajuku, rushing to see the Really Big Clock again and finishing up in Akihabara

Hakone
Day 4
 - Accommodation in Hakone
 - Sightseeing in Hakone

Day 5
 - Sightseeing in Hakone
 - Lunch at Hakone-Yumato and departing to Nikko

Nikko
Day 6
 - Accommodation in Nikko
 - Superb meals in Tokanso
 - Shoyo-en twice a day
 - Paying respect to the founder of Tokugawa shogunate in Tosho-gu
 - A tranquil walk in Kanmangafuchi

Nikko/Tokyo
Day 7
 - The sacred bridge - Shinkyo and Futarasan
 - Back to Tokyo (Ikebukuro)

Side note: Time for round 2 of lunch.. :P